BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003A08LP1|AL425057
(822 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1732 1510 0.0
>3x_Contig1732
Length = 24266
Score = 1510 bits (750), Expect = 0.0
Identities = 797/823 (96%), Gaps = 2/823 (0%)
Strand = Plus / Minus
Query: 1 gacttkatcaaagaagctgtagcagacggttggcactatgttggagatcgcgaatccttt 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3491 gacttgatcaaagaagctgtagcagacggttggcactatgttggagatcgcgaatccttt 3432
Query: 61 rataccttatccgagggtgataatgtgaaacttcctttgcttgctttgttagctgactac 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3431 aataccttatccgagggtgataatgtgaaacttcctttgcttgctttgttagctgactac 3372
Query: 121 gatataccctttgagattgatagattagattcggaatatccatccttgaragargaagct 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 3371 gatataccctttgagattgatagattagattcggaatatccatccttgaaagaagaagct 3312
Query: 181 atgactgcvatcaacgcattgtccaaagcaactagggattcagaccagggattttkcttg 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 3311 atgactgcaatcaacgcattgtccaaagcaactagggattcagaccagggatttttcttg 3252
Query: 241 ttagttgaaggttctcgtattgaccatgcaggtcatttgarcgatcctgctgcacaggtt 300
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 3251 ttagttgaaggttctcgtattgaccatgcaggtcatttgaacgatcctgctgcacaggtt 3192
Query: 301 cgtgaggtcactgcatatgatgagacgttcaaggctgttgttgaatacgctaaanrttca 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 3191 cgtgaggtcactgcatatgatgagacgttcaaggctgttgttgaatacgctaaaaattca 3132
Query: 361 gacgtagaaaccgtcataatttcracttcagatcatgaracaggtggtttggtcacggcc 420
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 3131 gacgtagaaaccgtcataatttcaacttcagatcatgaaacaggtggtttggtcacggcc 3072
Query: 421 agacaagtttctaaagcatatccggattatttrtggttacctgargtcttggcaaaagca 480
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 3071 agacaagtttctaaagcatatccggattatttatggttacctgaagtcttggcaaaagca 3012
Query: 481 caacattcgtgtgagtacttagcaagagagttgattcagaarvagcttcaaacttctgag 540
||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||
Sbjct: 3011 caacattcgtgtgagtacttagcaagaaagttgattcaaaaaaagcttcaaacttctgag 2952
Query: 541 acctcaaagggcaatctagttaagttcatcaaacatgarattgtggaagctggtttaggt 600
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2951 acctcaaagggcaatctagttaagttcatcaaacatgaaattgtggaagctggtttaggt 2892
Query: 601 atcaacgattatgctgacgaagatatcaragagcttgagagcttgatcgatacccctggc 660
|||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2891 atcaacgattatactgacgaagatatcaaagagcttgagagcttgatcgatacccctggc 2832
Query: 661 tttttgatggacaaattgaccgatatggtctctttcagggcgcagttgggctggacaaca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2831 tttttgatggacaaattgaccgatatggtctctttcagggcgcagttgggctggacaaca 2772
Query: 721 catggtcatagcgc-rtcgatgttaatatdtntgcntactccaacaaggacgggttgaag 779
|||||||||||||| ||||||||||||| | ||| ||||||||||||||||||||||||
Sbjct: 2771 catggtcatagcgcagtcgatgttaatatatatgcatactccaacaaggacgggttgaag 2712
Query: 780 tctaagattttggat-aacttggtggtaaccatgagaatattg 821
||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 2711 tctaagattttggataaacttggtggtaaccatgagaatattg 2669
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.32
Gapped
Lambda K H
1.40 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3552
Number of Sequences: 1807
Number of extensions: 3552
Number of successful extensions: 73
Number of sequences better than 1.0e-20: 1
length of query: 822
length of database: 10,358,551
effective HSP length: 16
effective length of query: 806
effective length of database: 10,329,639
effective search space: 8325689034
effective search space used: 8325689034
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.1 bits)